FSHD testing

Scientific research project aims to improve FSHD diagnostics, better understand genetics and epigenetics of FSHD

Dr. Peter Jones, PhD, and Dr. Takako Jones, PhD, of the Peter and Takako Jones Lab, an FSHD-focused research lab at the University of Nevada, Reno, in the USA, are conducting a research project to improve facioscapulohumeral muscular dystrophy (FSHD) diagnostics and to better understand the genetics and epigenetics of FSHD.

Current genetic testing for FSHD, where available, is a complicated, expensive process that requires a visit to a health care professional for a blood draw and often a referral. The Jones lab is investigating the utility of an alternative FSHD diagnostic approach that will be private, affordable and accessible to everyone worldwide.

They developed an inexpensive technique capable of identifying epigenetic characteristics distinctly associated with FSHD1 and FSHD2 using DNA found in saliva. Study participants will further validate this more affordable and accessible testing procedure to become an accepted and approved FSHD diagnostic option. To date, this approach has been successful specifically identifying FSHD1 and FSHD2. 

Participants can choose to have their research results returned to them and will learn about their individual epigenetics and some genetics for their own FSHD region, and if they correlate with FSHD1, FSHD2, or neither. Those who do not wish to see their research results still will be helping develop this new technology for eventual diagnostic purposes.

This is a research project and not currently an approved medical or genetic diagnostic test. Your results, if you choose to have them returned to you, are confidential and will not become part of your medical record. At this time, these research testing results will not meet inclusion criteria for clinical trials.

The combined anonymized results of the larger worldwide study will be published periodically in peer-reviewed scientific journals.

There is no cost to participate or to have the results of our research on your sample returned directly to you. Participation in this study is voluntary, private and confidential and is done in the privacy of your home. It is open to adults and children under 18, with written parental consent, anywhere in the world with access to mail.

WHO MAY WANT TO PARTICIPATE

Anyone with a confirmed genetic diagnosis of FSHD, a clinical diagnosis of FSHD, a suspicion of FSHD, or at risk for FSHD by being in a family with FSHD. You do not have to have a diagnosis of FSHD or have prior genetic testing for FSHD. In addition, we are seeking healthy family members.

HOW TO PARTICIPATE

If you’re interested in participating or have any questions about this project, please email peterjones@med.unr.edu or submit the Request a Kit form (more about the kit process below).

HOW THE PROJECT IS SUPPORTED

Although this testing is provided at no cost to participants, there is a cost to the lab. This cost is supported by grants from foundations and donations from generous families and individuals interested in seeing this work progress and to provide access to FSHD research testing to individuals in the USA and around the world.

To date, the Friends of FSH Research Foundation has provided two grants, the William R. Lewis family and Lynn and George Shaw have provided gifts, and other interested patients have made donations to the Peter and Takako Jones Lab Research Fund to support costs associated with this FSHD research testing project.

This testing will remain “no cost” to participants in the research study as long as funding is available for the research project so that no one is left behind.

More about this research project.

Person who tested for FSHD

We are grateful!

Thanks to the following groups and individuals who have made donations to the Peter and Takako Jones Lab to support costs associated with this FSHD research testing:

Friends of FSH Research provided a grant.

The William R. Lewis family provided a gift.

People who donated to Peter and Takako Jones FSHD lab in Reno, Nevada

Individual donors

  • Anonymous
  • Jared and Julie Bothe
  • Sherri Crawford, in honor and remembrance of Tom Crawford 
  • Hasenjaeger family
  • ML Jones family
  • Michele Langer
  • Lynn and George Shaw
  • Tony Sofia
  • John Tayloe

Get your FSHD test kit!

No blood, just saliva — a test you do in the comfort of your home.

1

Request your test kit

Complete the kit request form and our team will reach out with more details.

2

Collect your saliva

Follow the kit instructions you receive in the mail with your kit.

Watch how to collect your saliva in these English (first) and Español (second) videos:

3

Mail back your kit

Send your saliva to our lab in the package provided.

4

Get your results

Your results will be provided to you via email in a secure format.

Saliva-based FSHD diagnostic test available at no cost to participants

MyFSHD is pleased to facilitate the process of providing requests for testing to the Peter and Takako Jones Lab who performs research testing for FSHD. MyFSHD does not perform any testing, does not have access to your research test results, and does not provide you your test results.

In their lab located on the campus of the University of Nevada, Reno, the sole focus of scientists Peter L. Jones, PhD, and Takako I. Jones, PhD, is facioscapulohumeral muscular dystrophy.

For this project’s research testing, the Jones Lab uses the novel method they developed for identifying and distinguishing all forms of FSHD. It’s simply a saliva sample collected by individuals in the privacy of their own home and then mailed to the Peter and Takako Jones Lab where it is processed. Results are provided to each participant (if desired).

This research testing for FSHD, with a more than 99% accuracy, is available to anyone in the world with access to the mail or delivery service, and at no cost to participants. See “HOW THIS PROJECT IS SUPPORTED” in the article above. 

Current genetic testing for FSHD, which is performed in a clinical setting, isn’t available to many individuals around the world due to the complexity of the testing, the requirement for visiting a health care professional for a blood draw, the lack of access to testing facilities, and the high cost of FSHD genetic testing, which is often not covered by insurance (in the United States) or allowed by health care providers.

Request your kit via the Request a Kit form or email the Peter and Takako Jones Lab directly at peterjones@med.unr.edu.

See our FAQ for additional information.

Your FSHD test, results

Once your saliva kit is received by the Peter and Takako Jones Lab (which can take a week in the USA and much longer internationally), it typically takes about three to six weeks after that to get your results (if you want to receive them). If you have not received your results and you had requested them, please email peterjones@med.unr.edu.

WHAT YOU WILL FIND IN YOUR REPORT

  • Information about your genetics and epigenetics.
  • Details of your correlation with FSHD or not FSHD.
  • If FSHD, details of your correlation with FSHD1 or FSHD2.
  • Overall impression narrative from Dr. Peter L. Jones, PhD, about your test findings.
  • References and information on genetic counseling.
  • Figures illustrating FSHD types, chromosomes, haplotyping, etc. 

YOUR TEST RESULTS ARE CONFIDENTIAL

Your privacy is paramount, and your test results are confidential. MyFSHD does not have access to your results. The results will be provided directly to you by the Peter and Takako Jones Lab. The lab will not share your test result information with anyone else without your explicit consent. Your results will not be shared with your medical provider nor will they be linked to your personal medical record unless you do so yourself. Research test results will not be accepted for inclusion into a clinical trial.

Importantly, MyFSHD and the Peter and Takako Jones Lab …

  • Are NOT a biorepository.
  • Do NOT sequence your genome — your genomic data remains with you.
  • Are NOT a biobank — we do NOT provide your DNA to anyone.
  • Are NOT a registry — we do NOT provide a listing of participants to anyone.
  • Will NOT add you to a mailing list and you won’t be solicited.

Understanding your report

FSHD genetics & epigenetics, testing, & your research test results from the Jones lab (full version, Parts 1-3)

Part 1: FSHD genetics & epigenetics, clinically approved genetic testing, Jones lab's FSHD research test

Dr. Peter Jones gives a quick review of FSHD genetics and epigenetics, some of the genetic testing like the original Southern blot test and more current technology being used, clinically approved testing, and the FSHD epigenetic research testing being done by the Jones lab, University of Nevada, Reno.

Part 2: FSHD epigenetic research testing from the Jones lab

Dr. Peter Jones talks about the science behind the FSHD epigenetic research testing done at the Jones lab, University of Nevada, Reno School of Medicine. Learn about the basis of the test and how his lab performs the test.

Part 3: Understanding your FSHD research test report from the Jones lab

Dr. Peter Jones walks you through each page of your FSHD epigenetic research test from the Jones lab, University of Nevada, Reno School of Medicine. 

I have my FSHD test results from the Jones Lab, now what?

Still have questions?

If after watching the videos on this page you still need help understanding your results, please contact Dr. Peter Jones and he will set up a phone, Skype, or Zoom call to go over them with you.

Genetic counselor

If your result is consistent with FSHD, FSHD1 or FSHD2, you may want to speak with a genetic counselor to learn about potential implications. However, please note that this is a research test result, and a genetic counselor may suggest that you get an official FSHD test first.

FSHD community

You may want to talk with members of the FSHD community. There are many Facebook groups and foundations.

Not FSHD?

If your test result is “Healthy” or “Not FSHD” but you were clinically diagnosed with FSHD or feel you have a muscle disease, you may be a candidate for whole exome sequencing (WES). If you would like to discuss this option, reach out to Dr. Peter Jones.

How this FSHD epigenetic testing works

Dr. Takako Jones, PhD, of the Peter and Takako Jones Lab developed epigenetic testing for FSHD in 2014 originally as a method to study the epigenetics strictly for research purposes. See the original research paper.

It was soon realized, however, that not only did the technique readily distinguish FSHD1, FSHD2 and healthy, it also addressed many of the problems associated with FSHD genetic testing. So, work began on transitioning this highly accurate yet simple and low-cost research method for use as a potential FSHD diagnostic.

WATCH THE FOLLOWING VIDEOS TO LEARN ABOUT TESTING FOR FSHD USING EPIGENETICS, AND WHY AND HOW THIS TESTING IS AVAILABLE AT NO COST TO INDIVIDUALS WORLDWIDE. THEN, TAKE A DEEP DIVE INTO EPIGENETICS TESTING BY DIGGING INTO THE INFORMATION BELOW THE VIDEOS.

Drs. Peter and Takako Jones, PhD

The Joneses developed a novel method for identifying and distinguishing all forms of FSHD. They perform FSHD research testing in their research lab, the Peter and Takako Jones Lab, located at the University of Nevada, Reno School of Medicine, in Reno, Nevada, USA.

Their research focus is on FSHD, which is the most prevalent muscular dystrophy that affects males and females, children and adults.

They effectively combine Dr. Takako Jones’ expertise in molecular biology, developmental biology and cell biology with Dr. Peter Jones’ expertise in epigenetics, gene regulation and biochemistry to address questions from multiple angles. 

MyFSHD scientists Peter and Takako Jones, PhD (FSHD lab)

What is epigenetic research testing?

Why and how this FSHD epigenetic research testing is accessible around the globe at no cost to individuals.

Dive deep ...

Learn about epigenetic testing for FSHD in the area below. Click the red accordion bars to open/close them.

Dr. Takako Jones, PhD, of the Peter and Takako Jones Lab developed epigenetic testing for FSHD in 2014.

The technique was originally developed as a method to study the epigenetics of the FSHD region strictly for research purposes; however, it was soon realized that not only did the technique readily distinguish FSHD1, FSHD2 and healthy, it also addressed many of the problems associated with FSHD genetic testing.

The epigenetic component of this testing has two parts. The first assay is specific for FSHD permissive chromosomes (4A and 4AL). The second epigenetic assay determines if the epigenetic status (DNA methylation) is consistent with FSHD1 or FSHD2.

Diagnostics for FSHD

A proper diagnosis for any genetic disease should involve a combination of clinical evaluation, family history, genetic analysis and genetic counseling.

WATCH THE SHORT VIDEO BELOW TO LEARN THE DIFFERENCES BETWEEN RESEARCH AND CLIA-CERTIFIED TESTING. FOLLOWING THE VIDEO, TAKE A DEEP DIVE INTO THE VARIOUS FSHD DIAGNOSTICS AVAILABLE.

Differences between research testing and CLIA-certified testing

Dive deep ...

Learn about FSHD diagnostics in the area below. Click the red accordion bars to open/close them.

PFGE and Southern blotting

  • Pulsed-field gel electrophoresis (PFGE) is a technique for separating very large DNA fragments. Southern blotting is a technique for identifying DNA sequences using labeled DNA probes.

Molecular combing

  • Molecular combing stretches the DNA and hybridizes to sequence-specific fluorescently labeled probes to provide a direct visualization of the region and simultaneously detect the number of D4Z4 repeat units for all four D4Z4 arrays while identifying the associated alleles.

Single-molecule optical mapping

  • The SMOM system simultaneously detects the number of D4Z4 repeat units for all four D4Z4 arrays and identifies the associated alleles.

Summary of FSHD1 testing: Southern blotting vs. molecular combing vs. single-molecule optical mapping

Learn about the diagnostic methods used to assay DNA methylation and DNA sequencing for FSHD2:

  • Methyl-sensitive restriction enzyme (MSRE) digestion.
  • Bisulfite genomic sequencing.
  • Candidate gene sequencing for known FSHD2 genes.
  • Gene panel arrays for neuromuscular disease genes.
  • Whole exome sequencing.

Epigenetic FSHD testing can be performed on DNA from any human source such as saliva collected via a kit sent through standard mail services to any location worldwide. This testing greatly reduces the cost of FSHD testing.

Learn about epigenetic diagnostics which are based on the FSHD-specific methylation levels of the chromosome 4q and 10q D4Z4 arrays. Also find out about bisulfite genomic sequencing (BSS),  a technique that identifies the methylation status of each deoxycytidine (C) in the region of interest. Targeted BSS readily distinguishes healthy, FSHD1 and FSHD2.

A genetic counselor can help you understand complex genetic information and help you make informed decisions. According to the National Society of Genetic Counselors, a genetic counselor can help you understand your genetic risks based on your family history, genetic risks for certain diseases, whether genetic testing might be right for you, and what the results of genetic tests may mean for you and your family.

This Find a Genetic Counselor directory offers access to over 3,300 genetic counselors (US and Canada).

Stories from FSHD research testing participants

Read the true stories of some who have participated in this FSHD research testing. (Names have been changed.) Click the red accordion bars to open/close them.

Jim, in his 40s, went to his neurologist complaining of muscle fatigue and weakness and was clinically diagnosed with FSHD. However, both his genetic tests for FSHD1 and FSHD2 came back negative.

His neurologist, very experienced in FSHD, insisted he had FSHD and thought that Jim’s condition might be a new form of the disease. Jim enrolled in the FSHD research testing project at the Peter and Takako Jones Lab at the University of Nevada, Reno, where he was found to have the genetic and epigenetic signatures of FSHD2.

Jim went back to his neurologist with the result, was retested for FSHD2 using a different diagnostic company, and was confirmed to have a documented FSHD2 mutation that had been missed in the original test.

Maria, 50, has had progressive muscle weakness since her 20s. She was genetically confirmed as FSHD1 in 1998 by Southern blotting deletion testing.

Since FSHD is heritable, she had her two young children genetically tested, with one child, Joseph, testing positive for FSHD1, despite having no clinical signs.

Recently, Maria and her family enrolled in the FSHD research testing study at the Peter and Takako Jones Lab at the University of Nevada, Reno, participating as confirmed FSHD1 and healthy controls to help with assay validation. However, the results indicated that all three participants did not have FSHD.

Research testing determined that Maria and Joseph most likely had an FSHD1-sized contraction on a nonpermissive 4qB chromosome. Evidence of a contracted 4qB chromosome was then confirmed using standard genetic testing at a CLIA-approved facility, and the results were deemed “not consistent with FSHD.”

It was determined that the original FSHD genetic testing had not assayed for a permissive 4qA chromosome and thus left the family members with an incorrect diagnosis for over 20 years.

Andreia was clinically diagnosed with FSHD in her late 20s. She wanted to know if her child had inherited her disease, but they live in a country with no access to FSHD genetic testing.

After hearing about the possibility of accessible FSHD research testing on a Facebook group, she and her child enrolled in the project at the Peter and Takako Jones Lab at the University of Nevada, Reno.

Although it took several months due to international shipping delays, her condition was confirmed as being consistent with FSHD1 genetics and epigenetics. Importantly, her child’s genetic and epigenetic signatures were found to be inconsistent with FSHD, and the testing further confirmed that they did not inherit the familial FSHD1 chromosome.

Ahmed has an adult onset myopathy with some muscle weakness that is somewhat consistent with that found in FSHD; however, his FSHD1 genetic test came back negative.

Despite having no family history of FSHD, he was told he must be FSHD2. His physician refused to approve additional testing, so no FSHD2 test was performed.

Ahmed enrolled in the FSHD research testing study at the Peter and Takako Jones Lab at the University of Nevada, Reno, to confirm his potential FSHD2 diagnosis for his own peace of mind; however, the analysis of his genetic and epigenetic signatures found no indication of FSHD2.

This allowed him to make the decision to enroll in a different research study investigating the potential for indications of other neuromuscular diseases.

Jackie has had increasing muscle weakness in her upper arms since her teens, and based on her online investigations, she suspected that she has FSHD.

However, she can’t afford to pay for testing and her insurance will not cover it. She also does not want any official FSHD diagnosis on her medical record for fear of how if might impact her insurance or employment.

Jackie enrolled in the FSHD research testing study at the Peter and Takako Jones Lab at University of Nevada, Reno, at no cost to her and received her research results indicating that her genetic and epigenetic signatures are, in fact, consistent with being FSHD1.

She understands that this result will not qualify her for inclusion into a clinical trial; however, she can now choose if and when to get officially diagnosed for FSHD, knowing her money will be well spent.

Henry was clinically diagnosed with FSHD, which was genetically confirmed as FSHD1 in a CLIA-approved laboratory.

When he found out that a distant cousin in his family had also been diagnosed as FSHD1, he became concerned that there may be others in the family that were at risk and unaware.

He convinced many members of his extended family to participate in the FSHD research testing project despite the fact that many of them felt perfectly fine.

Much to everyone’s surprise, a number of seemingly healthy relatives were found to have genetics and epigenetics consistent with FSHD1 and had inherited the familial FSHD1 chromosome.

This new information was met with a range of responses from the family, some of whom were not prepared for the possibility of being genetically FSHD.

It is important to understand that genetic FSHD can be clinically asymptomatic or very mild, yet passed on to the next generation with a more severe outcome.

Many individuals with known FSHD status have participated in the FSHD research testing to help validate and improve the procedure to get us where we are.

In addition, we have helped many individuals and families across the USA and around the world learn about their likely FSHD genetic status.

We have helped those with no access to any diagnosis, individuals unable to afford genetic testing, and others struggling with a misdiagnosis of FSHD (clinical, genetic, or both).

Often, we are providing confidential research testing results for children and adults who want to keep the information private.

Regardless of your motivation, please seriously consider if you want to know the results of the research testing and the potential implications of this information. While it is not a formal clinically relevant diagnostic result, the impact of learning this information can be surprising.

We are here to help make sure you understand the results and can help you find support, if needed.

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